Welcome to the homepage for all content related to Quality Control of Sequence Data for the GINGER Program! You may navigate to the individual parts within Quality Control of Sequence Data by clicking on the tabs below. There are four parts to this module with corresponding videos and learning checks available as you click each link.
Learning Objectives
- Cram, VCF, gVCF, VDS, Matrix Table
- GATK
- Hail combiner
- DRAGEN
Lecture Videos and Learn Checks
Below is an overview of this module. Please watch the required videos and complete the corresponding learning checks to self-assess your comprehension of the key concepts covered. After you have completed the videos and learning checks, please complete the corresponding assignment.