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It is important to first remove variant and sample QCs toCorrectIncorrect
True or False: Removing high quality SNIPS makes it less likely to pick up on genome wide ancestryCorrectIncorrect
Place the steps for preparing data for PLINK PCA in the correct order:
Preform LD Pruning
Perform variant and sample QC
The ‘.eigenvec.var’ file is optional, unlessCorrectIncorrect