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Learning Dashboard > Genome Wide Association Studies

Genome Wide Association Studies

Course Content

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Modules Status
1

Module 1: Fundamentals of Association Testing
  • Part I: What is a Genome Wide Association Study
  • Part 2: Association Tests
  • Part 3: Tests for Additive Genetic Models

2

Module 2: Fundamentals of Association Testing II
  • Part 1: Regression approach (continuous traits)
  • Part 2: Regression approach (binary traits)
  • Part 3: Introduction to multivariate regression

3

Module 3: Fundamentals of Association Testing III
  • Part 1: Review of statistic concepts
  • Part 2: Sample Size Calculation in GWAS
  • Part 3: Multiple testing in genetic association studies

4

Module 4: Quality Control for GWAS I
  • Part 1: Genotyping Arrays
  • Part 2: Sample QC
  • Part 3: Variant QC Part 1 – Common Variants
  • Part 4: Variant QC Part 2 – Low Frequency and Rare Variants

5

Module 5: Quality Control for GWAS II
  • Part 1: Population Stratification
  • Part 2: Genomic Control
  • Part 3: Principal Component Analysis
  • Part 4: LD Score Regression

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Global Initiative for Neuropsychiatric Genetics Education in Research

Harvard T.H. Chan School of Public Health |
Department of Epidemiology
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Boston, MA 02115

Email: ginger@hsph.harvard.edu

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